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NAMESPACE
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NAMESPACE
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# Generated by roxygen2: do not edit by hand
export(annotate_and_reduce_gr)
export(annotate_gr)
export(bgzip_and_tabix)
export(binned_cna_average)
export(biotype_palette)
export(bp_to_distance)
export(clip_granges)
export(debugDefaultArguments)
export(downsample_bdg_table)
export(factify)
export(file_shunt)
export(flag_bam_reads)
export(genes_and_exons)
export(genome_add_bed_tiles)
export(genome_add_bedgraph)
export(genome_add_gr_tiles)
export(genome_plot)
export(get_bed_saturation)
export(get_density_y)
export(get_ensembl_ids)
export(get_exons)
export(get_karyotypes)
export(get_oncogenes)
export(get_plot_component_list)
export(get_seqsizes)
export(get_seqsizes_adj)
export(get_tads)
export(gg_theme)
export(grange_desc)
export(grep_local_motifs)
export(gtf_to_exons)
export(gtf_to_genes)
export(isometrify_table)
export(link_genecards)
export(localize_ogm_reads)
export(merge_bedgraph_grs)
export(oxford_collapse)
export(parse_bam_flags)
export(parse_ogm_reads)
export(pile_coords)
export(plot_genes)
export(plot_genes_pileup)
export(plot_karyotype_strip)
export(plot_rna_genome)
export(plot_split)
export(prettyBP)
export(prettyNumbers)
export(prettyTitle)
export(preview_granges)
export(preview_text_file)
export(randomize_grange)
export(read_bw_track)
export(read_cmap_file)
export(read_fastqc)
export(read_xmap_file)
export(resize_facets)
export(scale_to)
export(scan_bdg)
export(subset_and_trim_gr)
export(swap_columns)
export(thin_column)
export(trunc_tibble)
export(vectify)
import(BSgenome.Hsapiens.UCSC.hg38)
import(BiocGenerics)
import(Biostrings)
import(GenomeInfoDb)
import(GenomicAlignments)
import(GenomicRanges)
import(IRanges)
import(Rsamtools)
import(S4Vectors)
import(cowplot)
import(data.table)
import(dplyr)
import(drc)
import(ggnewscale)
import(ggplot2)
import(ggplotify)
import(ggrepel)
import(ggsci)
import(grid)
import(gridExtra)
import(magrittr)
import(regioneR)
import(rtracklayer)
import(scales)
import(stats)
import(stringi)
import(stringr)
import(tibble)
import(tictoc)
import(tidyr)