-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy pathcpgs_genes.txt
4914 lines (4913 loc) · 38.5 KB
/
cpgs_genes.txt
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
889
890
891
892
893
894
895
896
897
898
899
900
901
902
903
904
905
906
907
908
909
910
911
912
913
914
915
916
917
918
919
920
921
922
923
924
925
926
927
928
929
930
931
932
933
934
935
936
937
938
939
940
941
942
943
944
945
946
947
948
949
950
951
952
953
954
955
956
957
958
959
960
961
962
963
964
965
966
967
968
969
970
971
972
973
974
975
976
977
978
979
980
981
982
983
984
985
986
987
988
989
990
991
992
993
994
995
996
997
998
999
1000
SAMD11
RP11-54O7.3
AL645608.1
PLEKHN1
C1orf170
C1orf159
MIR429
MIR200A
MIR200B
RP11-465B22.8
TTLL10
TNFRSF4
TNFRSF18
UBE2J2
RP5-902P8.10
SCNN1D
CPSF3L
ACAP3
TAS1R3
PUSL1
GLTPD1
RP5-890O3.9
CDK11A
SLC35E2
RP1-283E3.4
RP1-283E3.8
GNB1
RP1-140A9.1
CALML6
TMEM52
C1orf86
AL590822.1
RP11-181G12.4
RP11-181G12.5
SKI
TPRG1L
RP11-46F15.2
TP73
WRAP73
C1orf174
LINC01134
KCNAB2
NPHP4
CHD5
RPL22
RNF207
RP1-120G22.11
LINC00337
HES3
PLEKHG5
TAS1R1
PHF13
KLHL21
THAP3
DNAJC11
RP11-312B8.1
CAMTA1
RNU1-8P
VAMP3
RERE
RP5-1115A15.1
NPPB
RNU5E
RNU5E-4P
KIAA2013
RP3-467K16.7
FHAD1
RP3-467K16.2
FAM131C
ARHGEF19-AS1
RSG1
ALDH4A1
MIR1290
IFFO2
UBR4
RP1-43E13.2
NBL1
HTR6
AL136115.1
TXLNA
HDAC1
MARCKSL1
TSSK3
RP4-811H24.9
FAM229A
BSDC1
SYNC
KIAA0754
BMP8B
RP1-118J21.25
TRIT1
CAP1
ZNF684
NFYC
MIR30E
MIR30C1
RNU6-536P
RP11-163G10.4
CCDC17
GPBP1L1
RP4-533D7.4
EPS15
RP11-253A20.1
OSBPL9
USP24
RP11-101C11.1
GYG1P3
JAK1
MIR101
MIR3671
GBP5
LRRC8C
RP5-1007M22.2
RP11-302M6.4
snoU13.425
ZNF326
GEMIN8P4
AKNAD1
SPATA42
KIAA1324
C1orf194
ST7L
CAPZA1
RHOC
PPM1J
RP11-426L16.9
RP11-426L16.10
MAGI3
HIPK1
RP5-1073O3.7
TRIM33
BCAS2
DENND2C
CSDE1
NRAS
U3.39
RNU6-817P
IGSF3
C1orf137
CD101
RP11-27K13.3
TTF2
VTCN1
HIST2H2AA3
HIST2H2BD
HIST2H2BE
ZMYND11
LARP4B
RP11-363N22.2
GTPBP4
AL359878.1
WDR37
IDI1
PITRM1
PITRM1-AS1
RP11-184A2.2
KLF6
ASB13
FAM208B
RP11-336A10.2
GDI2
FBXO18
RP11-536K7.3
IL15RA
IL2RA
RP11-536K7.5
SNORA14.1
RBM17
PFKFB3
RP11-414H17.5
RP11-563J2.2
DKFZP667F0711
KIN
ATP5C1
CELF2-AS2
DHTKD1
U6.61
RNU6ATAC39P
RP11-7C6.1
CDNF
HSPA14
SUV39H2
RP11-398C13.6
NSUN6
ARL5B-AS1
ARL5B
CASC10
MIR1915
SKIDA1
MLLT10
DNAJC1
SPAG6
PIP4K2A
OTUD1
NRP1
RP11-342D11.2
C10orf25
ZNF22
OR13A1
ALOX5
MARCH8
ZFAND4
SYT15
GPRIN2
NPY4R
LINC00842
AGAP7
MSMB
NCOA4
CISD1
IPMK
TFAM
DDX21
KIAA1279
MED28P1
AC016821.1
LRRC20
CEP57L1P1
SLC29A3
snoU13.303
CDH23
SPOCK2
ASCC1
ANAPC16
Y_RNA.129
DDIT4
RP11-442H21.2
MICU1
MCU
RPS24
POLR3A
SNORA71.1
AC074323.1
ZMIZ1
ZMIZ1-AS1
SFTPA2
GHITM
RP11-338I21.1
CCSER2
WAPAL
RP11-77P6.2
RNU1-19P
SNCG
MMRN2
ADIRF-AS1
ADIRF
RP11-96C23.5
RP11-96C23.15
FAM35A
GLUD1
PTEN
KLLN
SLIT1
MMS19
UBTD1
ANKRD2
RP11-129J12.2
NKX2
RP11-483F11.7
ENTPD7
DNMBP
DNMBP-AS1
CPN1
ERLIN1
RP11-316M21.7
CHUK
RP11-316M21.6
SNORA12
CWF19L1
RNU6-422P
BLOC1S2
PKD2L1
SCD
RP11-34D15.2
FAM178A
RP11-179B2.2
LZTS2
RP11-324L3.5
LBX1
LBX1-AS1
SNORD112.41
RNU2-43P
FGF8
NPM3
C10orf76
HPS6
CNNM2
RP11-724N1.1
NEURL1
SLK
SFR1
MIR609
GSTO2
MIR4482
ITPRIP
CCDC147
CCDC147-AS1
snoU13.162
SMNDC1
AL355512.1
DUSP5
RP11-525A16.4
TCF7L2
RP11-57H14.2
SLC18A2
RP11-501J20.5
CACUL1
U3.58
EIF3A
SNORA19
SNORA19.1
SFXN4
PRDX3
GRK5
GRK5-IT1
RGS10
TIAL1
INPP5F
MCMBP
SEC23IP
PLEKHA1
C10orf88
PSTK
IKZF5
ACADSB
HMX3
CHST15
OAT
NKX1
FAM53B
DHX32
FANK1
CLRN3
PTPRE
EBF3
BNIP3
PWWP2B
C10orf91
INPP5A
IFITM2
IFITM5
RP11-326C3.4
B4GALNT4
PHRF1
MIR210
MIR210HG
DRD4
MUC5AC
MUC5B
TOLLIP
TOLLIP-AS1
MOB2
H19
MRPL23-AS1
AC051649.6
IGF2-AS
IGF2
INS-IGF2
INS
CDKN1C
SLC22A18AS
SLC22A18
AC131971.1
NAP1L4
RNU1-91P
MRGPRG
MRGPRG-AS1
AC109309.4
ZNF195
TSSC2
RNU6-1143P
RNU7-50P
NUP98
PGAP2
RHOG
STIM1
AC090587.5
AC090587.4
MIR4687
SNORA7.4
RRM1
TRIM22
OR56A1
OR56B4
OR56B3P
FAM160A2
CNGA4
SMPD1
APBB1
ARFIP2
TIMM10B
RRP8
ILK
RP11-732A19.8
TAF10
RP11-732A19.2
TPP1
RP11-732A19.9
DCHS1
MRPL17
RP11-732A19.1
PLEKHA7
OR7E14P
RPS13
SNORD14B
AC116533.1
SNORD14A
NCR3LG1
ABCC8
USH1C
OTOG
TSG101
HTATIP2
CSTF3
CSTF3-AS1
ABTB2
TRIM44
TTC17
RP11-484D2.2
EXT2
ALX4
TSPAN18
PRDM11
PHF21A
ATG13
HARBI1
SNORD67.1
LRP4
ARFGAP2
PACSIN3
RP11-390K5.6
RP11-390K5.1
NR1H3
ACP2
SLC39A13
PSMC3
RP11-750H9.5
RNU6-1302P
RAPSN
RNU5E-10P
NDUFS3
KBTBD4
FNBP4
NUP160
PTPRJ
RP11-872D17.4
snoU13.196
P2RX3
SSRP1
SLC43A3
RP11-872D17.8
RTN4RL2
RN7SKP259
RP11-624G17.3
SLC43A1
TIMM10
SMTNL1
UBE2L6
RPS4XP13
SERPING1
MIR130A
YPEL4
CLP1
AP000662.4
ZDHHC5
MED19
TMX2
TMX2-CTNND1
C11orf31
BTBD18
RP11-691N7.6
CTNND1
OR5B21
LPXN
ZFP91
ZFP91-CNTF
CNTF
FAM111A
AP001258.4
AP001258.5
RNU7-58P
PATL1
AP000640.2
CCDC86
RP11-804A23.2
PRPF19
RP11-881M11.2
TMEM132A
RP11-881M11.4
CD5
VPS37C
DDB1
DAK
TMEM138
CYB561A3
BEST1
FTH1
AP003733.1
INCENP
SCGB1D4
ASRGL1
RP11-703H8.7
NPM1P35
TMEM223
TMEM179B
RP11-727F15.12
C11orf84
MARK2
RCOR2
MACROD1
OTUB1
RASGRP2
PYGM
SF1
AP001462.6
RP11-869B15.1
EHD1
AP001187.1
MIR192
MIR194
RP11-665N17.4
ARL2
RP11-399J13.3
CDCA5
ZFPL1
VPS51
TM7SF2
AP003068.9
ZNHIT2
AP003068.12
MRPL49
FAU
MALAT1
MUS81
CFL1
EFEMP2
CST6
BANF1
EIF1AD
RAB1B
RP11-867G23.2
RP11-867G23.13
RP11-867G23.12
RP11-867G23.10
SNORA43.2
BBS1
RBM4
RNU4-39P
RBM14
RBM14-RBM4
PC
LRFN4
RHOD
KDM2A
AP001885.1
ADRBK1
POLD4
CLCF1
RN7SKP239
AP003419.11
CARNS1
PPP1CA
RPS6KB2
PTPRCAP
AP003419.16
CORO1B
TMEM134
GPR152
CABP4
CTC-1337H24.1
CTC-1337H24.2
AIP
PITPNM1
CDK2AP2
CABP2
NUDT8
NDUFS8
RP5-901A4.1
CHKA
CTD-2655K5.1
SUV420H1
PPFIA1
AP000487.6
LRTOMT
ANAPC15
LAMTOR1
snoU13.233
FOLR3
FOLR1
RP11-7N14.1
CLPB
PDE2A
ARAP1
ARAP1-AS1
STARD10
ATG16L2
FCHSD2
FAM168A
PLEKHB1
AP000860.2
CTD-2562J17.9
RPS3
SNORD15A
PRKRIR
RP11-111M22.2
INTS4
PCF11
CCDC90B
RP11-727A23.10
C11orf73
TAF1D
MED17
DYNC2H1
FDX1
SIK2
PPP2R1B
C11orf1
FDXACB1
ALG9
CRYAB
C11orf52
DIXDC1
RNA5SP351
TIMM8B
SDHD
TEX12
AP000908.1
NNMT
BUD13
AP006216.10
AP006216.11
ZNF259
APOA5
AP006216.5
APOA4
APOC3
APOA1-AS
APOA1
SIK3
AP000936.4
PAFAH1B2
RP11-109L13.5
DSCAML1
RP11-728F11.3
IL10RA
SCN4B
SCN2B
CD3G
CD3D
UBE4A
ATP5L
RP11-770J1.5
KMT2A
RP11-770J1.4
TTC36
TMEM25
RP11-770J1.3
ARCN1
IFT46
RNU6-1157P
AP002954.4
UPK2
BCL9L
RN7SL688P
CCDC84
RPL23AP64
RP11-110I1.11
RP11-110I1.5
RPS25
TRAPPC4
MIR3656
HMBS
DPAGT1
C2CD2L
H2AFX
HINFP
CBL
CCDC153
SC5D
SORL1
RP11-730K11.1
HSPA8
SNORD14D
HEPACAM
CCDC15
TMEM218
STT3A
STT3A-AS1
HYLS1
DDX25
PUS3
RPUSD4
FAM118B
RP11-50B3.4
RNU4-86P
ST3GAL4
RP11-688I9.2
RP11-1007G5.2
PRDM10
LINC00167
APLP2
AP003041.2
ST14
RP11-121M22.1
ZBTB44
RP11-890B15.2
IGSF9B
AP000911.1
JAM3
NCAPD3
VPS26B
ACAD8
THYN1
GLB1L3
GLB1L2
WNK1
RNU4ATAC16P
RAD52
ERC1
RP11-359B12.2
WNT5B
ADIPOR2
LRTM2
RP11-664D1.1
PARP11
C12orf5
RP11-264F23.1
C12orf4
RAD51AP1
PLEKHG6
TNFRSF1A
RN7SL391P
SCNN1A
LTBR
CD27
TAPBPL
CD27-AS1
VAMP1
NCAPD2
MRPL51
GAPDH
RP5-940J5.3
IFFO1
RP5-940J5.8
NOP2
CHD4
RP5-940J5.6
SCARNA11
LPAR5
ACRBP
ING4
RP4-761J14.8
ZNF384
PIANP
COPS7A
RP4-761J14.9
PTMS
CD4
LEPREL2
GPR162
GNB3
CDCA3
USP5
LRRC23
TPI1
SPSB2
RPL13P5
ENO2
ATN1
C12orf57
RNU7
PTPN6
EMG1
MIR141
MIR200C
PHB2
SCARNA12
U47924.27
U47924.29
LPCAT3
C1S
U47924.30
C1RL
C1R
C1RL-AS1
RNU6-485P
CLSTN3
RBP5
RP11-273B20.1
RNU6-275P
CLEC4E
A2ML1
A2ML1-AS2
A2ML1-AS1
PHC1
RP11-705C15.4
RP11-705C15.2
CLECL1
CD69
KLRF1
CLEC2B
RP11-290C10.1
CLEC12A
AC091814.3
CLEC7A
TMEM52B
OLR1
GABARAPL1
RP11-656E20.5
RNU7-60P
ETV6
MANSC1
LOH12CR1
LOH12CR2
APOLD1
RP11-180M15.4
DDX47
MIR614
HEBP1
HTR7P1
RP11-377D9.3
EMP1
RNU6-491P
ATF7IP
RPL30P11
HIST4H4
RP11-174G6.5
WBP11
C12orf60
ERP27
ARHGDIB
PDE6H
SSPN
BHLHE41
RP11-283G6.3
ERGIC2
RNU6-318P
METTL20
RNU6-494P
DNM1L
YARS2
TWF1
ARID2
LINC00938
SLC38A1
SLC38A2
RP11-96H19.1
RP11-474P2.2
RPAP3
RP1-197B17.3
ENDOU
RAPGEF3
SLC48A1
HDAC7
RP5-1057I20.2
VDR
RP11-89H19.1
TMEM106C
RP1-228P16.5
RNU6-1203P
SENP1
PFKM
ASB8
C12orf68
OR10AD1
H1FNT
ANP32D
C12orf54
OR8S1
RP11-722P11.4
LALBA
SNORA34
LINC00935
DDX23
RND1
FKBP11
CCDC65
RP11-302B13.1
RP11-386G11.3
RHEBL1
TUBA1A
TUBA1C
DIP2B
ATF1
RP11-60E8.2
TMPRSS12
RN7SL519P
METTL7A
HIGD1C
RP11-407N8.4
SLC11A2
U6.54
RNU6-1273P
LETMD1
CSRNP2
TFCP2
RNU6-199P
Y_RNA.219
DAZAP2
SMAGP
CELA1
SPRYD3
IGFBP6
PFDN5
AAAS
SP7
SP1
AMHR2
MAP3K12
RP11-793H13.10
ATF7
ATP5G2
CALCOCO1
SNORD81.4
HOXC13
HOXC13-AS
HOXC11
HOTAIR
MIR196A2
HOXC6
HOXC9
HOXC-AS2
HOXC-AS1
HOXC8
HOXC4
AC012531.25
RP11-834C11.14
HOXC5
MIR615
SMUG1
RP11-968A15.2
CBX5
HNRNPA1
RP11-968A15.8
RNU6-950P
MIR148B
GPR84
ZNF385A
ITGA5
RP11-753H16.3
GTSF1
NCKAP1L
RP11-1049A21.2
TESPA1
OR10P1
ITGA7
BLOC1S1
RP11-644F5.10
SARNP
ORMDL2
RAB5B
CDK2
PMEL
RP11-973D8.4
RPS26
RP11-603J24.4
PA2G4
RPL41
RP11-603J24.17
ZC3H10
ESYT1
RP11-603J24.6
RP11-603J24.5
SMARCC2
RP11-977G19.5
NABP2
RNF41
COQ10A
ANKRD52
CS
RP11-977G19.14
RP11-977G19.11
RP11-977G19.12
RP11-977G19.10
CNPY2
RNU7-40P
STAT2
TIMELESS
RBMS2
BAZ2A
NACA
SNORA48.4
ZBTB39
TAC3
MYO1A
LRP1
STAT6
RP11-545N8.3
SHMT2
NXPH4
Y_RNA.356
INHBC
R3HDM2
RP11-756H6.1
INHBE
GLI1
ARHGAP9
MARS
RNU6-594P
RN7SL312P