diff --git a/repo_utils/answer_key/help.txt b/repo_utils/answer_key/help.txt
index 3f67d90..ba1f8fa 100644
--- a/repo_utils/answer_key/help.txt
+++ b/repo_utils/answer_key/help.txt
@@ -1,6 +1,6 @@
 usage: truvari [-h] CMD ...
 
-Truvari v5.1.2-dev Structural Variant Benchmarking and Annotation
+Truvari v5.2.0 Structural Variant Benchmarking and Annotation
 
 Available commands:
     bench         Performance metrics from comparison of two VCFs
diff --git a/truvari/__init__.py b/truvari/__init__.py
index f129dd9..6c6c9f9 100644
--- a/truvari/__init__.py
+++ b/truvari/__init__.py
@@ -67,7 +67,7 @@
 :data:`truvari.SZBINTYPE`
 """
 
-__version__ = '5.1.2-dev'
+__version__ = '5.2.0'
 
 
 from truvari.bench import (
diff --git a/truvari/refine.py b/truvari/refine.py
index 26f93ca..93df51d 100644
--- a/truvari/refine.py
+++ b/truvari/refine.py
@@ -343,9 +343,6 @@ def refine_main(cmdargs):
                               args.benchdir, "refine.log.txt")),
                           show_version=True)
     logging.info("Params:\n%s", json.dumps(vars(args), indent=4))
-    if args.align == 'mafft' and not args.use_original_vcfs:
-        logging.warning("--align poa works better than mafft when not --use-original-vcfs")
-
 
     # Stratify.
     regions = initial_stratify(args.benchdir,